Cottage Cheese Muffins
on Feb 22, 2025, Updated Sep 18, 2025
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If you’re looking for a wholesome, protein-packed snack for your little one, these Cottage Cheese Muffins are a must-try! They’re naturally sweetened, incredibly soft, and can be customized with chocolate chips or blueberries for extra deliciousness, perfect for baby-led weaning. Plus, they’re quick to make—just blend, pour, and bake! These muffins are my kids’ favorites, especially with lunch or as a mid-day snack!

Why Cottage Cheese Muffins are Great for Toddlers & Families
High in Protein & Calcium – Cottage cheese adds protein for growing toddlers and helps keep them full longer.
Soft & Easy to Eat – The texture in these easy toddler high-protein muffins is fluffy and moist, perfect for little ones still learning to chew.
Naturally Sweetened – Just 2 tbsp of maple syrup makes these lightly sweet without added sugar.
Customizable – Add fruit, nuts, or even cinnamon to switch up the flavors!
Great for Busy Parents – No mixer needed—just blend and bake for a quick, healthy snack! Great for baby-led weaning!
Ingredients
- 1 cup cottage cheese
- 1½ cups all-purpose flour
- 2 large eggs
- ½ cup milk
- 2 tsp baking powder
- 2 tsp vanilla
- 2 tbsp maple syrup
- Mix-ins: ¼ cup chocolate chips or blueberries
How to Make These Easy Cottage Cheese Muffins
- Blend the Ingredients:
- Add cottage cheese, flour, eggs, milk, baking powder, vanilla, and maple syrup to a blender.
- Blend until smooth, but do not over blend or they won’t come out right.
- Add Mix-ins:
- Stir in chocolate chips or blueberries if using.
- Bake:
- Grease or line a muffin tin and pour the batter into each cup, filling about ¾ of the way.
- Bake at 350°F (175°C) for 20-25 minutes, or until a toothpick inserted in the center comes out clean.
- Cool & Serve:
- Let the muffins cool for a few minutes before serving.
Substitutions
Cottage Cheese: Can be replaced with ricotta or Greek yogurt for a similar texture and protein content, with a slightly different flavor.
Flour: Use whole wheat flour for added fiber or a gluten-free blend for dietary restrictions.
Milk: Any milk works—dairy or plant-based alternatives like almond or oat milk.
Maple Syrup: Honey or agave nectar can be used instead.
Mix-ins: Feel free to add blueberries, nuts, dried fruits, or other fruit to suit your taste.
Storing Extra Cottage Cheese Protein Muffins
- Fridge: Store in an airtight container in the fridge for up to 5 days.
- Freezer: Freeze for up to 3 months. Simply thaw overnight in the fridge or warm in the microwave for 15-20 seconds before serving.
Common Questions
Do I have to use a blender?
- No, but I recommend using a blender to get the batter smooth and creamy for more thorough baking.
Can I make these protein-rich muffins gluten-free?
- Yes! Substitute the all-purpose flour with a gluten-free flour blend. Ensure your baking powder is gluten-free as well.
Can I use other mix-ins?
- Yes you can! Frozen blueberries work well. No need to thaw them; just fold them into the batter to prevent excess bleeding. You could also add in raspberries, chopped nuts, or other dried fruits.
More Healthy Toddler-Approved Recipes
Strawberry Oat Bars – Soft, chewy, and naturally sweet, these Strawberry Oat Bars are made with real fruit and whole grain oats—perfect for breakfast, snack time, or lunchboxes.
Peanut Butter Banana Muffins – These fluffy muffins combine the classic flavors of peanut butter and banana into a wholesome, protein-rich treat that’s ideal for toddlers and adults.
3 Ingredient Chicken Nuggets – Made with just chicken, egg, and a little cheese, these homemade chicken nuggets are a quick, healthy alternative to store-bought—perfect for little hands.
Banana Avocado Pancakes – These soft, nutrient-packed pancakes use banana and avocado for a naturally sweet and creamy texture—great for baby-led weaning or a healthy toddler breakfast.
PB&J Oat Cups – A fun twist on a classic combo, these PB&J Oat Cups are made with oats, peanut butter, and fruit spread for a no-refined-sugar snack that toddlers love.
If your kids love these protein-rich cottage cheese muffins let me know! Tag me @reallittlemeals so I can hear about all of your delicious creations!

Cottage Cheese Muffins
Equipment
Ingredients
- 1 cup cottage cheese
- 1.5 cups all purpose flour
- 2 eggs, large
- 1/2 cup milk
- 2 tsp baking powder
- 2 tsp vanilla
- 2 tbsp maple syrup
- 1/4 cup chocolate chips
Instructions
- Preheat oven to 350 degrees F (175 C)
- Add cottage cheese, flour, eggs, milk, baking powder, vanilla, and maple syrup to a blender. Blend until smooth, but do not over blend.
- Stir in chocolate chips or blueberries.
- Grease or line a muffin tin and pour the batter into each of the 12 cups, filling about ¾ of the way.
- Bake at 350°F (175°C) for 20-25 minutes, or until a toothpick inserted in the center comes out clean.
- Let the muffins cool for a few minutes before serving.
Notes
Nutrition
Nutrition information is automatically calculated, so should only be used as an approximation.




These were amazing! We accidentally made them with only 2 tsp maple syrup (instead of 2 tbsp), and they were still delicious.
I am so glad to hear the muffins were a hit!
I love these. I’ve been making them for my breakfast as an adult and make a little cinnamon strudel topping. I wish there was a way to calculate the nutritional value as I through them in mini muffin tin and make them poppable in my mouth rather than a big muffin but no where can you find the nutritional value to determine the amount of protein
I made these this afternoon. A few things: it does not mix well in a blender. Would prob use a mixer next time. They are very good. I would add a tad more syrup to get sweeter flavor next time. I ate 2 for protein and kept me full!
Can I use whole wheat flour instead of all purpose?
Yes that would be fine!
Love!! My 1 year on and 12 year old loved them equally! I thought they were pretty tasty too! I forgot to blend the mix and just hand stirred and they still turned out great! Next batch I will blend 🙂 Thank you!!
Sprinkle with cinnamon prior to baking Delicious recipe
May I use honey instead of maple syrup?
Yes!
Hi! My toddler loves these! Question of about how much protein is in one standard muffin by chance? We’re trying to keep a better eye on how much protein is in his snacks😄 We typically will give him one as a meal with fruit or even as a snack.
Easy and quick to make! I added a scoop of vanilla whey for extra protein. It came out delicious, my 2 year old is obsessed!
These were great! My kids asked for seconds. Love the hidden protein
Made these today and they were amazing! My 16 month old (also my husband and I) loved them. Do you think it will come out good if I sub oat flour instead of all purpose flour?
We love these! Thank you for offering a great recipe that’s a perfect alternative to a basic breakfast. How much protein is in one muffin?
Your recipes are fantastic. This is the second recipe of yours that has been a hit for my toddler and that the whole family can enjoy.